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Does Kinesio tape work?

R data science Bayesian

Analysis of a home experiment using Bayesian Poisson regression.


Author

Affiliation

Miha Gazvoda

 

Published

May 14, 2022

DOI


In the last couple of years, my girlfriend sprained her ankle multiple times. A month ago, a ligament in her angle started to get frequently dislocated. She has to locate it back manually, a couple of times per day. Ouch.

She decided to try Kinesio tape to improve her condition. Since she sometimes forgets to put it on, that’s an opportunity to evaluate whether the tape works; decreases the number of dislocations per day.

We will use Bayesian Poisson regression to tackle the problem. Why Poisson?

If the number of trials n is very large (and usually unknown) and the probability of a success p is very small, then a binomial distribution converges to a Poisson distribution with an expected rate of events per unit time of λ=np. - Statistical Rethinking by Richard McElreath

So, during the day, there are a lot of opportunities (trials) for dislocations, but dislocations (successes) happen rarely.

Data

Here’s the data I collected:

library(tidyverse)
library(rethinking)
library(tidybayes.rethinking)
library(tidybayes)
library(bayesplot)

df <- tribble(
    ~date, ~dislocations, ~tape, ~hours,
    1, 5, 0, 12,
    2, 4, 0, 12,
    3, 3, 0, 12,
    4, 1, 1, 12,
    5, 0, 1, 12,
    6, 1, 0, 12,
    7, 3, 0, 12,
    8, 2, 0, 12,
    9, 0, 1, 12,
    10, 1, 1, 8,
    10, 1, 0, 4,
    11, 0, 1, 12,
    12, 1, 1, 12,
    13, 1, 0, 2,
    13, 2, 1, 10
  ) |>
  mutate(
    across(.fns = as.integer),
    day = hours / 12
  )

The data represents dislocation counts per date (the actual date is not important so it’s just an integer). I assumed there are twelve active hours per date. Because sometimes she used the tape for a couple of hours, there can be multiple rows per date with the number of hours that sum up to twelve. Dummy variable tape denotes whether she used the tape. Based on the hours I calculated the portion of the day.

From the plot below we can see there’s no trend in the number of dislocations.

df |> 
  mutate(dislocations_per_day = dislocations / day) |> 
  ggplot(aes(date, dislocations_per_day, color = as.factor(tape))) + 
  geom_point() + 
  labs(title = "Dislocations per date seem stable", color = "Tape use")

Modeling

Our assumptions:

There’s no placebo in our experiment, so a placebo might account for potential improvements. However, there are no side effects of using the tape (besides monetary) so we are fine even if the improvement would be due to placebo.

The system can be described using the following formulas:

dislocationsiPoisson(λi)log(λi)=log(dayi)+a+btapeiaN(0.5,1)bN(0,1)

Daily dislocations follow the Poisson distribution with parameter λ. log(λ) is calculated as a linear combination of log(day) that presents a duration, parameter a, rate of dislocations without the tape, and parameter b that represents the increase in rate due to the use of the tape. Since we have number of dislocations per different time durations, not only per day, we include the log(dayi) term. This makes sense because we are interested in the rate of dislocations per day (represented by twelve active hours):

λidayi=exp(a+btapei) If we log and apply log(a/b)=log(a)log(b) on both sides, we get:

log(λi)log(dayi)=a+btapei Now we only need to move log(dayi) to the right side. Voila!

We rewrite the same set of formulas to STAN using the rethinking package:

d <- transmute(df, tape, dislocations, day)

m <- ulam(
  alist(
    dislocations ~ dpois(lambda),
    log(lambda) <- log(day) + a + b * tape,
    a ~ dnorm(0.5, 1),
    b ~ dnorm(0, 1),
    gq> real[1]: ratio <<- exp(a + b) / exp(a)
  ),
  data = d, warmup = 200, chains = 4, cores = 4 
)

We’ll also calculate the ratio between dislocation rates of taped and non-taped ankle.

By calling summary we can see that b has a negative value, denoting that the tape helps. Similarly, ratio tells us that dislocations happen around third the usual rate when the tape is used.

precis(m)
            mean        sd       5.5%     94.5%    n_eff    Rhat4
a      1.0070880 0.2266219  0.6429809  1.360209 1219.078 1.001280
b     -1.1253477 0.4301082 -1.8359004 -0.462828 1501.478 1.000527
ratio  0.3550894 0.1528327  0.1594699  0.629501 1480.858 1.000277

We would have to exponentiate the values of a and b to get the actual dislocation rates. Below, we’ll plot the posterior distribution of ratio that is calculated as ratio=ea+bea=λtapeλnotape

posterior_ratio <- spread_draws(m, ratio)

ggplot(posterior_ratio, aes(ratio, fill = stat(abs(x) < 0.5))) + 
  stat_halfeye() + 
  labs(title = "Dislocation rate decreases for a factor of 3 when using the tape")

Bayesian approach enables us is to make probability statements about the posterior distributions. For example, we can calculate probability that ratio is lower than 0.5 (integral of blue area on the plot above):

summarise(posterior_ratio, prob_less_than_0.5 = mean(ratio < 0.5))
# A tibble: 1 × 1
  prob_less_than_0.5
               <dbl>
1              0.844

Let’s also do a posterior predictive check - simulating replicated data under the fitted model and comparing these to the observed dataGelman and Hill, 2007, p. 158. This tells us whether the model gives “valid” predictions about reality.

dislocations_rep <- predicted_draws(object = m, newdata = d, ndraws = 50) |> 
  ungroup() |> 
  pivot_wider(id_cols = .draw, names_from = .row, values_from = .prediction) |> 
  select(-.draw) |> 
  as.matrix()

ppc_dens_overlay_grouped(
  d$dislocations, 
  dislocations_rep, 
  group = if_else(d$tape > 0, "tape", "no tape")
) + 
  labs(title = "Comparison of empirical data distributions")

We can see that true data has shorter tails compared to the simulated ones. This can be due to my girlfriend changing her behavior after multiple dislocations.

From now on, she uses Kinesio tape every day. I’m kidding. Writing this blog post took me so long that her condition improved by itself. Time works even better than Kinesio tape.

Footnotes

  1. She could flip a coin in the morning and wear a tape based on the outcome.[↩]
  2. Gelman and Hill, 2007, p. 158[↩]